STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ22726.1Transcriptional regulator, GntR family. (242 aa)    
Predicted Functional Partners:
SEJ25230.1
Transcriptional regulator, GntR family.
 
     0.757
SEJ71003.1
Transcriptional regulator, GntR family.
  
  
 0.749
SEJ85912.1
Transcriptional regulator, GntR family.
 
     0.740
SEJ98931.1
Transcriptional regulator, GntR family.
  
  
 0.737
SEK09753.1
Transcriptional regulator, GntR family.
  
  
 0.737
SEJ20677.1
Transcriptional regulator, GntR family.
  
  
 0.725
SEK15865.1
Transcriptional regulator, GntR family.
  
  
 0.721
SEJ91361.1
Transcriptional regulator, GntR family.
  
  
 0.714
SEJ39423.1
Transcriptional regulator, GntR family.
  
  
 0.711
SEK11869.1
Transcriptional regulator, GntR family.
  
  
 0.701
Your Current Organism:
Paraburkholderia tropica
NCBI taxonomy Id: 92647
Other names: ATCC BAA-831, Burkholderia tropica, Burkholderia tropica Reis et al. 2004, DSM 15359, LMG 22274, LMG:22274, P. tropica, Paraburkholderia tropica (Reis et al. 2004) Sawana et al. 2015, strain Ppe8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.