STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ24657.1Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (365 aa)    
Predicted Functional Partners:
SEJ24607.1
Putative spermidine/putrescine transport system permease protein.
 
 0.976
SEJ24628.1
Putative spermidine/putrescine transport system permease protein.
 
 0.968
SEI79793.1
Putative spermidine/putrescine transport system permease protein.
 
 0.919
SEJ24580.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
 
 0.898
SEK15168.1
Putative spermidine/putrescine transport system permease protein.
 
 0.889
SEI79828.1
Putative spermidine/putrescine transport system permease protein.
 
 0.881
SEJ67060.1
Putative spermidine/putrescine transport system permease protein.
 
 0.880
SEJ67041.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.866
SEK15166.1
Putative spermidine/putrescine transport system permease protein.
 
 0.857
SEI87884.1
Putrescine transport system permease protein.
 
 0.846
Your Current Organism:
Paraburkholderia tropica
NCBI taxonomy Id: 92647
Other names: ATCC BAA-831, Burkholderia tropica, Burkholderia tropica Reis et al. 2004, DSM 15359, LMG 22274, LMG:22274, P. tropica, Paraburkholderia tropica (Reis et al. 2004) Sawana et al. 2015, strain Ppe8
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.