STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ67515.1Response regulator receiver domain-containing protein. (128 aa)    
Predicted Functional Partners:
SEK14078.1
PAS domain S-box-containing protein.
 
 0.913
SEK14180.1
PAS domain S-box-containing protein.
 
 0.913
SEK08085.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
 0.904
SEJ67655.1
Two-component system, LuxR family, sensor kinase FixL.
 
 0.873
SEK14237.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.868
SEJ21749.1
Multi-sensor hybrid histidine kinase.
   
 0.862
SEK12172.1
PAS/PAC sensor signal transduction histidine kinase.
 
 0.850
SEK05366.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.848
SEK05407.1
PAS domain S-box-containing protein.
 
 0.848
SEJ83243.1
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.843
Your Current Organism:
Paraburkholderia tropica
NCBI taxonomy Id: 92647
Other names: ATCC BAA-831, Burkholderia tropica, Burkholderia tropica Reis et al. 2004, DSM 15359, LMG 22274, LMG:22274, P. tropica, Paraburkholderia tropica (Reis et al. 2004) Sawana et al. 2015, strain Ppe8
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