STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrDDihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (344 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
 0.989
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
 
 
 0.986
SEJ10655.1
Dihydroorotase.
  
 0.978
SEJ79337.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.978
SEK11937.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
  
 0.978
SEK14117.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.978
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
 
 0.968
pyrF
Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
 
 0.941
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
 
 0.931
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
 
  
 0.912
Your Current Organism:
Paraburkholderia tropica
NCBI taxonomy Id: 92647
Other names: ATCC BAA-831, Burkholderia tropica, Burkholderia tropica Reis et al. 2004, DSM 15359, LMG 22274, LMG:22274, P. tropica, Paraburkholderia tropica (Reis et al. 2004) Sawana et al. 2015, strain Ppe8
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