Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEJ17070.1 | SEJ83557.1 | SAMN05216550_10333 | SAMN05216550_10987 | Pimeloyl-ACP methyl ester carboxylesterase. | Uncharacterized conserved protein, contains NRDE domain. | 0.432 |
SEJ83506.1 | SEJ83545.1 | SAMN05216550_10983 | SAMN05216550_10986 | DNA polymerase III, delta prime subunit. | Hypothetical protein. | 0.586 |
SEJ83506.1 | SEJ83557.1 | SAMN05216550_10983 | SAMN05216550_10987 | DNA polymerase III, delta prime subunit. | Uncharacterized conserved protein, contains NRDE domain. | 0.405 |
SEJ83506.1 | mltG | SAMN05216550_10983 | SAMN05216550_10985 | DNA polymerase III, delta prime subunit. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.761 |
SEJ83506.1 | tmk | SAMN05216550_10983 | SAMN05216550_10984 | DNA polymerase III, delta prime subunit. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.958 |
SEJ83545.1 | SEJ83506.1 | SAMN05216550_10986 | SAMN05216550_10983 | Hypothetical protein. | DNA polymerase III, delta prime subunit. | 0.586 |
SEJ83545.1 | SEJ83557.1 | SAMN05216550_10986 | SAMN05216550_10987 | Hypothetical protein. | Uncharacterized conserved protein, contains NRDE domain. | 0.600 |
SEJ83545.1 | mltG | SAMN05216550_10986 | SAMN05216550_10985 | Hypothetical protein. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.619 |
SEJ83545.1 | tmk | SAMN05216550_10986 | SAMN05216550_10984 | Hypothetical protein. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.619 |
SEJ83557.1 | SEJ17070.1 | SAMN05216550_10987 | SAMN05216550_10333 | Uncharacterized conserved protein, contains NRDE domain. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.432 |
SEJ83557.1 | SEJ83506.1 | SAMN05216550_10987 | SAMN05216550_10983 | Uncharacterized conserved protein, contains NRDE domain. | DNA polymerase III, delta prime subunit. | 0.405 |
SEJ83557.1 | SEJ83545.1 | SAMN05216550_10987 | SAMN05216550_10986 | Uncharacterized conserved protein, contains NRDE domain. | Hypothetical protein. | 0.600 |
SEJ83557.1 | mltG | SAMN05216550_10987 | SAMN05216550_10985 | Uncharacterized conserved protein, contains NRDE domain. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.483 |
SEJ83557.1 | tmk | SAMN05216550_10987 | SAMN05216550_10984 | Uncharacterized conserved protein, contains NRDE domain. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.483 |
mltG | SEJ83506.1 | SAMN05216550_10985 | SAMN05216550_10983 | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | DNA polymerase III, delta prime subunit. | 0.761 |
mltG | SEJ83545.1 | SAMN05216550_10985 | SAMN05216550_10986 | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | Hypothetical protein. | 0.619 |
mltG | SEJ83557.1 | SAMN05216550_10985 | SAMN05216550_10987 | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | Uncharacterized conserved protein, contains NRDE domain. | 0.483 |
mltG | tmk | SAMN05216550_10985 | SAMN05216550_10984 | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.867 |
tmk | SEJ83506.1 | SAMN05216550_10984 | SAMN05216550_10983 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | DNA polymerase III, delta prime subunit. | 0.958 |
tmk | SEJ83545.1 | SAMN05216550_10984 | SAMN05216550_10986 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | Hypothetical protein. | 0.619 |
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