Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEJ88972.1 | SEJ88991.1 | SAMN05216550_11043 | SAMN05216550_11044 | Glutathione S-transferase. | Hypothetical protein. | 0.439 |
SEJ88972.1 | SEJ89008.1 | SAMN05216550_11043 | SAMN05216550_11045 | Glutathione S-transferase. | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. | 0.408 |
SEJ88991.1 | SEJ88972.1 | SAMN05216550_11044 | SAMN05216550_11043 | Hypothetical protein. | Glutathione S-transferase. | 0.439 |
SEJ88991.1 | SEJ89008.1 | SAMN05216550_11044 | SAMN05216550_11045 | Hypothetical protein. | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. | 0.424 |
SEJ88991.1 | SEJ89022.1 | SAMN05216550_11044 | SAMN05216550_11046 | Hypothetical protein. | Cupin 2 domain-containing protein. | 0.423 |
SEJ89008.1 | SEJ88972.1 | SAMN05216550_11045 | SAMN05216550_11043 | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. | Glutathione S-transferase. | 0.408 |
SEJ89008.1 | SEJ88991.1 | SAMN05216550_11045 | SAMN05216550_11044 | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. | Hypothetical protein. | 0.424 |
SEJ89008.1 | SEJ89022.1 | SAMN05216550_11045 | SAMN05216550_11046 | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. | Cupin 2 domain-containing protein. | 0.782 |
SEJ89022.1 | SEJ88991.1 | SAMN05216550_11046 | SAMN05216550_11044 | Cupin 2 domain-containing protein. | Hypothetical protein. | 0.423 |
SEJ89022.1 | SEJ89008.1 | SAMN05216550_11046 | SAMN05216550_11045 | Cupin 2 domain-containing protein. | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. | 0.782 |