STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ99501.1Nicotinate dehydrogenase subunit A. (180 aa)    
Predicted Functional Partners:
SEJ99561.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.996
SEK12077.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.996
SEK14248.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 0.992
SEJ99492.1
Nicotinate dehydrogenase subunit B.
  
 0.991
SEJ52525.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 0.988
SEK14899.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 0.988
SEK10696.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.986
SEJ09027.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
  
  0.983
SEJ52506.1
Carbon-monoxide dehydrogenase medium subunit.
 
 0.962
SEJ99477.1
Xanthine dehydrogenase accessory factor.
 
 
 0.946
Your Current Organism:
Paraburkholderia tropica
NCBI taxonomy Id: 92647
Other names: ATCC BAA-831, Burkholderia tropica, Burkholderia tropica Reis et al. 2004, DSM 15359, LMG 22274, LMG:22274, P. tropica, Paraburkholderia tropica (Reis et al. 2004) Sawana et al. 2015, strain Ppe8
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