STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK11980.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (420 aa)    
Predicted Functional Partners:
SEK11984.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.997
SEK11987.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.967
SEK09616.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.940
SEK09612.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.920
SEJ78669.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.902
SEJ83018.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.897
SEJ25313.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.887
SEK11977.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.878
SEK11267.1
Sorbitol/mannitol transport system permease protein.
 
 0.873
SEK12039.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.862
Your Current Organism:
Paraburkholderia tropica
NCBI taxonomy Id: 92647
Other names: ATCC BAA-831, Burkholderia tropica, Burkholderia tropica Reis et al. 2004, DSM 15359, LMG 22274, LMG:22274, P. tropica, Paraburkholderia tropica (Reis et al. 2004) Sawana et al. 2015, strain Ppe8
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