STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK14834.1Probable biosynthetic protein, Pnap_2097 family. (291 aa)    
Predicted Functional Partners:
SEK14831.1
MSMEG_0570 family protein.
 
   
 0.932
SEK14832.1
Putative flavoprotein involved in K+ transport.
 
   
 0.929
SEK14827.1
Putative N-acetyltransferase, MSMEG_0567 N-terminal domain family.
 
     0.899
SEK14825.1
Radical SAM protein, MSMEG_0568 family.
 
     0.895
SEK14821.1
GTP cyclohydrolase II.
 
     0.886
SEK14829.1
Hypothetical protein.
 
     0.886
SEK14823.1
Aliphatic nitrilase.
 
     0.875
SEK14835.1
methylmalonyl-CoA mutase.
     
 0.787
SEJ11068.1
dTDP-4-amino-4,6-dideoxygalactose transaminase.
  
 
 0.735
SEJ85163.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.735
Your Current Organism:
Paraburkholderia tropica
NCBI taxonomy Id: 92647
Other names: ATCC BAA-831, Burkholderia tropica, Burkholderia tropica Reis et al. 2004, DSM 15359, LMG 22274, LMG:22274, P. tropica, Paraburkholderia tropica (Reis et al. 2004) Sawana et al. 2015, strain Ppe8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.