STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAL98105.1Putative oxidoreductase FAD-binding subunit. (270 aa)    
Predicted Functional Partners:
xdh
Xanthine dehydrogenase.
 
 
 0.997
BAL98571.1
Putative aldehyde oxidoreductase.
 
 
 0.987
BAL98688.1
Putative oxidoreductase molybdopterin binding subunit.
 
 
 0.867
BAL98136.1
Carbon monoxide dehydrogenase molybdoprotein family protein.
 
 
 0.832
BAL98174.1
Putative oxidoreductase.
 
 
 0.831
BAL98689.1
Putative carbon monoxide dehydrogenase small subunit.
 
 
 0.825
BAL98570.1
Putative oxidoreductase.
  
     0.681
BAM01995.1
Hypothetical protein.
 
  
 0.614
BAL98065.1
Hypothetical protein.
 
  
 0.592
BAM01996.1
Hypothetical protein.
 
  
 0.558
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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