STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAL98106.1Putative DNA-binding protein. (203 aa)    
Predicted Functional Partners:
BAM00486.1
Putative two-component hybrid sensor and regulator.
  
 
 0.629
BAL98348.1
Putative GntR family transcriptional regulator.
  
  
 0.597
BAM01324.1
Putative GntR family transcriptional regulator.
  
  
 0.597
BAM01710.1
Putative GntR family transcriptional regulator.
  
  
 0.597
BAM02106.1
Putative GntR family transcriptional regulator.
  
  
 0.597
BAL99332.1
Putative two-component hybrid sensor and regulator.
  
 
 0.595
npdA
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
  
    0.571
BAM00041.1
Putative transcriptional regulator.
 
 
 0.567
xdh
Xanthine dehydrogenase.
  
    0.563
BAL98105.1
Putative oxidoreductase FAD-binding subunit.
       0.540
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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