STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAL98314.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
sufC
ATP-dependent transporter SufC.
 
  
 0.786
BAM00078.1
Putative SUF system FeS assembly protein.
  
    0.685
BAL98313.1
Putative restriction endonuclease.
       0.610
sufD
Protein SufD.
 
   
 0.610
sufB
Protein SufB.
 
   
 0.606
BAM00077.1
Putative cysteine desulfurase/selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.593
BAL98315.1
Putative methylmalonyl-CoA epimerase.
       0.592
BAL98312.1
Putative glycerophosphoryl diester phosphodiesterase.
       0.570
fadN
3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.551
mvk
Mevalonate kinase.
       0.523
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.