STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAL98384.1Putative mannose-1-phosphate guanyltransferase. (849 aa)    
Predicted Functional Partners:
BAM02004.1
Putative nucleotidyl transferase.
  
 
 0.968
BAM01070.1
Putative mannose-6-phosphateisomerase.
  
 
 0.950
BAM01675.1
Putative mannose-1-phosphate guanyltransferase.
 
 
0.945
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
 0.944
pmi-2
Mannose-6-phosphate isomerase.
  
 0.943
selB
Selenocysteine-specific elongation factor.
   
 0.928
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
 
 0.901
rfbA
Glucose-1-phosphate thymidylyltransferase.
 
  
0.890
BAL98493.1
Putative glycosyltransferase.
  
  
 0.793
BAM01185.1
Putative glycosyltransferase.
  
  
 0.793
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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