STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAL98754.1Putative nitrous oxide reductase. (656 aa)    
Predicted Functional Partners:
BAL98758.1
Hypothetical protein.
 
 
 0.958
ctaC
Cytochrome c oxidase polypeptide II.
 
  
 0.957
BAL98756.1
Putative ABC transporter substrate binding protein.
 
  
 0.937
BAL98755.1
Hypothetical protein.
 
  
 0.925
BAL98759.1
Hypothetical protein.
 
  
 0.921
BAL98757.1
Putative ABC transporter ATP-binding protein.
 
 
 0.718
BAM01634.1
Putative ABC transporter permease protein.
  
 
 0.712
BAL99320.1
Hypothetical protein.
 
     0.693
BAM00882.1
Putative bo3-type cytochrome c oxidase.
 
  
 0.617
BAL98760.1
Cytochrome c family protein.
 
  
 0.598
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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