STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAL99280.1Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. (161 aa)    
Predicted Functional Partners:
ccmC
Heme exporter protein CcmC.
 
 
 0.994
ccmB
Heme exporter protein CcmB.
 
 
 0.968
ccmF
Cytochrome c-type biogenesis protein CcmF.
 
 
 0.921
ccmH
Cytochrome c-type biogenesis protein CcmH; Possible subunit of a heme lyase.
 
  
 0.814
ccmA
Heme exporter protein CcmA.
 
     0.713
BAL99279.1
Hypothetical protein.
       0.658
BAM01867.1
Cytochrome c family protein.
 
   
 0.632
BAL99875.1
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
  
   
 0.535
BAM00591.1
Hypothetical protein.
 
     0.511
BAL98694.1
Hypothetical protein.
 
  
 0.498
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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