STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAL99539.1Hypothetical protein. (530 aa)    
Predicted Functional Partners:
BAL99538.1
Hypothetical protein.
 
  
 0.946
BAL99262.1
Hypothetical protein.
    
 0.781
BAM00078.1
Putative SUF system FeS assembly protein.
   
 
 0.756
BAM00208.1
Hypothetical protein.
  
     0.673
BAM00522.1
Hypothetical protein.
  
     0.567
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.547
BAL98377.1
Hypothetical protein.
 
     0.528
comEC
Competence protein ComEC.
   
 
 0.516
BAL99482.1
Putative multicopper oxidase.
  
   
 0.493
BAM01399.1
Hypothetical protein; Belongs to the CinA family.
 
   
 0.467
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.