BAL99874.1 protein (Caldilinea aerophila) - STRING interaction network

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second shell of interactors

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

BAL99874.1

Putative branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (611 aa)

Predicted Functional Partners:

BAL99873.1

0.999

BAL99168.1

0.997

BAM00849.1

0.997

BAM01021.1

0.997

BAL99471.1

0.996

BAL99872.1

0.996

BAL99167.1

0.992

BAM01022.1

0.992

BAM00848.1

0.990

BAL99466.1

0.979

Your Current Organism:

Caldilinea aerophila

NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAL99167.1	BAL99168.1	CLDAP_11280	CLDAP_11290	Putative branched-chain amino acid ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter ATP-binding protein.	0.834
BAL99167.1	BAL99471.1	CLDAP_11280	CLDAP_14320	Putative branched-chain amino acid ABC transporter ATP-binding protein.	Putative ABC transporter ATP-binding protein.	0.576
BAL99167.1	BAL99873.1	CLDAP_11280	CLDAP_18340	Putative branched-chain amino acid ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter permease/ATP-binding protein.	0.535
BAL99167.1	BAL99874.1	CLDAP_11280	CLDAP_18350	Putative branched-chain amino acid ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.992
BAL99167.1	BAM00849.1	CLDAP_11280	CLDAP_28090	Putative branched-chain amino acid ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter ATP-binding protein.	0.563
BAL99167.1	BAM01021.1	CLDAP_11280	CLDAP_29810	Putative branched-chain amino acid ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter ATP-binding protein.	0.541
BAL99168.1	BAL99167.1	CLDAP_11290	CLDAP_11280	Putative branched-chain amino acid ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter ATP-binding protein.	0.834
BAL99168.1	BAL99466.1	CLDAP_11290	CLDAP_14270	Putative branched-chain amino acid ABC transporter ATP-binding protein.	Putative ABC transporter ATP-binding protein.	0.579
BAL99168.1	BAL99872.1	CLDAP_11290	CLDAP_18330	Putative branched-chain amino acid ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter ATP-binding protein.	0.583
BAL99168.1	BAL99874.1	CLDAP_11290	CLDAP_18350	Putative branched-chain amino acid ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.997
BAL99168.1	BAM00848.1	CLDAP_11290	CLDAP_28080	Putative branched-chain amino acid ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter ATP-binding protein.	0.565
BAL99168.1	BAM01022.1	CLDAP_11290	CLDAP_29820	Putative branched-chain amino acid ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter ATP-binding protein.	0.556
BAL99466.1	BAL99168.1	CLDAP_14270	CLDAP_11290	Putative ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter ATP-binding protein.	0.579
BAL99466.1	BAL99471.1	CLDAP_14270	CLDAP_14320	Putative ABC transporter ATP-binding protein.	Putative ABC transporter ATP-binding protein.	0.668
BAL99466.1	BAL99873.1	CLDAP_14270	CLDAP_18340	Putative ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter permease/ATP-binding protein.	0.580
BAL99466.1	BAL99874.1	CLDAP_14270	CLDAP_18350	Putative ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.	0.979
BAL99466.1	BAM00849.1	CLDAP_14270	CLDAP_28090	Putative ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter ATP-binding protein.	0.590
BAL99466.1	BAM01021.1	CLDAP_14270	CLDAP_29810	Putative ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter ATP-binding protein.	0.579
BAL99471.1	BAL99167.1	CLDAP_14320	CLDAP_11280	Putative ABC transporter ATP-binding protein.	Putative branched-chain amino acid ABC transporter ATP-binding protein.	0.576
BAL99471.1	BAL99466.1	CLDAP_14320	CLDAP_14270	Putative ABC transporter ATP-binding protein.	Putative ABC transporter ATP-binding protein.	0.668

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Network Stats

number of nodes:

11

number of edges:

49

average node degree:

8.91

avg. local clustering coefficient:

0.881

expected number of edges:

11

PPI enrichment p-value:

< 1.0e-16

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0000096

Sulfur amino acid metabolic process

3 of 22

1.91

1.04

0.0097

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0008705

Methionine synthase activity

2 of 2

2.77

1.09

0.0106

GO:0031419

Cobalamin binding

2 of 3

2.6

1.08

0.0106

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:9085

Mixed, incl. Transsulfuration, and Hint domain superfamily

3 of 6

2.47

1.83

0.00040

CL:540

Homocysteine-binding domain, and Transsulfuration

2 of 5

2.37

0.88

0.0242

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00270

Cysteine and methionine metabolism

3 of 37

1.68

1.13

0.0045

map00450

Selenocompound metabolism

2 of 21

1.75

0.71

0.0421

map04122

Sulfur relay system

2 of 26

1.66

0.7

0.0421

map00670

One carbon pool by folate

2 of 29

1.61

0.69

0.0421

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF02574

Homocysteine S-methyltransferase

2 of 3

2.6

0.95

0.0191

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR036873

Rhodanese-like domain superfamily

4 of 14

2.23

2.37

2.41e-05

IPR001763

Rhodanese-like domain

4 of 15

2.2

2.35

2.41e-05

IPR036589

Homocysteine-binding domain superfamily

2 of 3

2.6

0.99

0.0157

IPR003726

Homocysteine-binding domain

2 of 3

2.6

0.99

0.0157

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00450

Rhodanese Homology Domain

4 of 14

2.23

2.87

1.92e-06

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