STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAL99900.1Hypothetical protein; Belongs to the HesB/IscA family. (123 aa)    
Predicted Functional Partners:
BAM00078.1
Putative SUF system FeS assembly protein.
 
  
 0.939
iscS
Cysteine desulfurase.
 
  
 0.854
nifU
Iron-sulfur cluster assembly protein.
  
 
 0.846
BAL98600.1
Hypothetical protein.
    
 
 0.760
BAL98626.1
Hypothetical protein.
    
 
 0.673
sufC
ATP-dependent transporter SufC.
  
 
 0.653
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
 0.612
sufB
Protein SufB.
  
 
 0.606
sufD
Protein SufD.
  
 
 0.606
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
     
 0.595
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.