STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAL99913.1Putative ABC transporter substrate binding protein; Belongs to the bacterial solute-binding protein 3 family. (314 aa)    
Predicted Functional Partners:
BAL99914.1
Putative ABC transporter permease protein.
 
 0.947
BAL98585.1
Putative amino acid ABC transporter permease protein.
 
 0.945
BAL98583.1
Putative amino acid ABC transporter permease protein.
 
 0.874
BAL98584.1
Putative amino acid ABC transporter ATP-binding protein.
 
 
 0.872
BAL98863.1
Putative amino acid ABC transporter ATP-binding protein.
 
 
 0.870
BAL99122.1
Putative amino acid ABC transporter permease protein.
 
 0.863
BAL98862.1
Putative amino acid ABC transporter permease protein.
 
 0.847
BAL98861.1
Putative amino acid ABC transporter permease protein.
 
  
 0.774
BAL99912.1
Putative dehydrogenase/oxidoreductase.
       0.651
BAM01133.1
Putative two-component hybrid sensor and regulator.
  
 
 0.463
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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