STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macBPutative ABC transporter ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (266 aa)    
Predicted Functional Partners:
BAL99979.1
Putative ABC transporter permease protein.
 
 0.998
BAL99373.1
Putative ABC transporter permease protein.
 
 
 0.973
BAL99977.1
Secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.966
BAL99763.1
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.894
BAL99870.1
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.892
BAL98336.1
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.890
lolC
Lipoprotein releasing system transmembrane protein LolC.
 
 
 0.861
BAL99317.1
Putative ABC transporter permease protein.
 
 
 0.844
lolC-2
Lipoprotein releasing system transmembrane protein LolC.
 
 
 0.837
BAL99021.1
Putative ABC transporter permease protein.
 
 
    0.686
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
Server load: low (10%) [HD]