STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM00420.1Hypothetical protein. (241 aa)    
Predicted Functional Partners:
BAL99451.1
Hypothetical protein.
  
     0.712
BAM01648.1
Hypothetical protein.
  
     0.691
BAL98771.1
Hypothetical protein.
  
     0.636
BAM01501.1
Putative sphingosine-1-phosphate lyase.
  
     0.552
BAM01753.1
Putative LysR family transcriptional regulator.
  
     0.537
BAM00419.1
Hypothetical protein.
       0.524
BAL99211.1
Putative ferredoxin--NADP(+) reductase.
  
     0.516
BAM00212.1
Hypothetical protein.
  
     0.478
BAM00421.1
Putative OmpR family two-component response regulator.
       0.450
BAM01649.1
Hypothetical protein.
  
     0.436
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.