STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM00633.1Putative glycosyltransferase. (371 aa)    
Predicted Functional Partners:
BAL98247.1
Putative glycosyltransferase.
 
    0.939
BAL99350.1
Putative glycosyltransferase.
 
    0.920
BAM00821.1
Putative glycosyltransferase.
 
    0.915
BAL99079.1
Putative glycosyltransferase.
 
    0.883
cysE
Serine acetyltransferase.
  
  
 0.782
BAM00634.1
Hypothetical protein.
       0.773
BAL99808.1
Putative glycosyltransferase.
 
    0.670
BAM00818.1
Putative glycosyltransferase.
 
    0.644
BAL99442.1
Hypothetical protein.
 
    0.499
BAL98411.1
Hypothetical protein.
 
   
 0.477
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.