STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM00652.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
iolG-2
Inositol 2-dehydrogenase.
 
 
  0.970
iolE
2-keto-myo-inositol dehydratase.
 
  
  0.956
iolG-3
Inositol 2-dehydrogenase.
 
 
  0.956
iolG
Inositol 2-dehydrogenase.
 
 
  0.945
BAM00643.1
Hypothetical protein.
 
  
  0.935
BAM01329.1
Putative inositol 2-dehydrogenase.
  
 
  0.935
BAM01245.1
Putative oxidoreductase.
   
 
  0.925
BAM01499.1
Putative oxidoreductase.
   
 
  0.925
BAM00651.1
Putative oxidoreductase.
  
    0.762
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.706
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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