STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iolB5-deoxy-glucuronate isomerase. (303 aa)    
Predicted Functional Partners:
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
 
 0.999
iolC
5-dehydro-2-deoxygluconokinase IolC.
 
 0.997
iolE
2-keto-myo-inositol dehydratase.
  
 0.926
BAM00643.1
Hypothetical protein.
  
 0.915
iolG
Inositol 2-dehydrogenase.
 
  
 0.885
iolG-2
Inositol 2-dehydrogenase.
 
  
 0.885
tal-2
Transaldolase.
 
    0.873
BAM00648.1
Putative ABC transporter substrate binding protein.
 
  
 0.803
mmsA
Methylmalonate-semialdehyde dehydrogenase.
 
  
 0.800
BAM00646.1
Putative ABC transporter ATP-binding protein.
 
  
 0.785
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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