STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM01032.1Putative glycosyltransferase. (427 aa)    
Predicted Functional Partners:
BAM01033.1
Putative glycosyltransferase.
     0.854
BAL98247.1
Putative glycosyltransferase.
 
    0.821
BAL99350.1
Putative glycosyltransferase.
 
 
    0.808
BAL98411.1
Hypothetical protein.
 
   
 0.682
BAM01030.1
Hypothetical protein.
       0.661
BAM01031.1
Putative hydrolase.
       0.661
BAM00821.1
Putative glycosyltransferase.
 
    0.527
BAM01554.1
Hypothetical protein.
  
 0.526
BAL98235.1
Putative glycosyltransferase.
  
     0.497
BAM00306.1
Putative extracellular serine protease.
   
 0.468
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.