STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM01034.1Hypothetical protein. (436 aa)    
Predicted Functional Partners:
selB
Selenocysteine-specific elongation factor.
       0.824
BAL99002.1
Hypothetical protein.
  
     0.761
BAL99178.1
Hypothetical protein.
 
     0.758
BAL98786.1
Hypothetical protein.
  
     0.751
BAL99256.1
Hypothetical protein.
  
     0.731
BAM01077.1
Hypothetical protein.
  
     0.718
BAL99573.1
Hypothetical protein.
 
 
   0.703
BAL98747.1
Putative glycoside hydrolase.
 
     0.701
BAL98147.1
Hypothetical protein.
  
     0.694
BAM00723.1
Hypothetical protein.
 
     0.691
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.