STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM01149.1Putative ABC transporter substrate binding protein. (539 aa)    
Predicted Functional Partners:
BAM01150.1
Putative dipeptide ABC transporter permease protein.
   0.939
BAM01151.1
Putative ABC transporter permease protein.
   0.916
BAL99163.1
Putative ABC transporter permease protein.
   0.862
BAL99020.1
Putative ABC transporter permease protein.
   0.849
BAL99344.1
Putative ABC transporter permease protein.
   0.830
BAL99021.1
Putative ABC transporter permease protein.
   0.809
BAL99162.1
Putative ABC transporter permease protein.
   0.808
BAL99343.1
Putative ABC transporter permease protein.
   0.807
BAL98154.1
Putative oligopeptide ABC transporter permease protein.
 
   0.729
BAM01318.1
Putative ABC transporter permease protein.
 
   0.714
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.