STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM01202.1Hypothetical protein. (380 aa)    
Predicted Functional Partners:
BAM01200.1
Putative oxidoreductase.
 
    0.915
BAM01201.1
6-pyruvoyl tetrahydropterin synthase family protein.
 
     0.896
BAM01043.1
Hypothetical protein.
    0.828
BAL98642.1
Putative glycosyltransferase.
  
     0.687
BAL98239.1
Putative glycosyltransferase.
  
     0.654
ribA
GTP cyclohydrolase-2; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
  
    0.653
BAM01198.1
Hypothetical protein.
     
 0.553
BAM01582.1
Putative UDP-glucose 6-dehydrogenase.
 
  
 0.551
BAL98735.1
Putative glycosyltransferase.
  
     0.538
BAL98645.1
Putative glycosyltransferase.
  
     0.504
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.