STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM01683.1Putative ABC transporter permease protein. (312 aa)    
Predicted Functional Partners:
BAM01682.1
Putative ABC transporter permease protein.
   0.953
BAM01140.1
Putative ABC transporter permease protein.
 
   0.836
BAM01876.1
Putative ABC transporter permease protein.
 
   0.833
BAM01706.1
Putative ABC transporter permease protein.
 
   0.832
araQ-2
L-arabinose ABC transporter permease protein.
 
   0.831
BAM00348.1
Putative ABC transporter permease protein.
 
   0.831
BAM00855.1
Putative ABC transporter permease protein.
 
   0.829
BAM01687.1
Putative ABC transporter permease protein.
 
   0.828
BAM01537.1
Putative ABC transporter permease protein.
 
   0.827
BAM01790.1
Putative ABC transporter permease protein.
  
   0.826
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.