STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM01784.1Putative penicillin-binding protein. (935 aa)    
Predicted Functional Partners:
BAL98477.1
Peptidase M23 family protein.
  
   
 0.739
rodA
Rod shape-determining protein RodA; Belongs to the SEDS family.
  
   
 0.733
ftsI
Cell division protein FtsI.
 
 
 
 0.725
BAL98853.1
Putative penicillin-binding protein.
 
 
 
 0.724
ftsW
Cell division protein FtsW; Belongs to the SEDS family.
  
   
 0.717
BAM01075.1
Peptidase M23 family protein.
  
   
 0.713
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
  
   
 0.655
BAM01023.1
Peptidase M23 family protein.
  
   
 0.640
BAL99508.1
Peptidase M23 family protein.
 
  
 0.633
BAM01783.1
Hypothetical protein.
       0.628
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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