STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM01927.1Hypothetical protein. (67 aa)    
Predicted Functional Partners:
BAM01928.1
Hypothetical protein.
 
 
 0.966
BAM01929.1
Hypothetical protein.
 
     0.517
BAM02064.1
Hypothetical protein.
 
     0.482
BAM02065.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
   
 0.470
BAM01930.1
Hypothetical protein.
       0.453
BAM01922.1
Hypothetical protein.
       0.450
BAM01923.1
Hypothetical protein.
       0.450
BAM01924.1
Hypothetical protein.
       0.450
BAM01925.1
Hypothetical protein.
       0.450
BAM01926.1
Hypothetical protein.
       0.450
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.