STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM01931.1Putative ATP-dependent helicase. (1740 aa)    
Predicted Functional Partners:
BAM01924.1
Hypothetical protein.
 
     0.839
BAM01921.1
Hypothetical protein.
 
   
 0.826
BAM01932.1
Hypothetical protein.
       0.773
BAM00377.1
Putative protein kinase.
 
      0.751
BAM01929.1
Hypothetical protein.
       0.732
BAM01930.1
Hypothetical protein.
       0.732
BAM01933.1
Hypothetical protein.
       0.655
BAM00673.1
Hypothetical protein.
  
     0.527
BAM00783.1
Hypothetical protein.
  
     0.515
BAM01934.1
Hypothetical protein.
       0.510
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.