STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM01941.1Hypothetical protein. (559 aa)    
Predicted Functional Partners:
BAM01942.1
Putative CoA-transferase; Belongs to the CoA-transferase III family.
 
     0.729
BAM01190.1
Hypothetical protein.
  
     0.681
BAM00212.1
Hypothetical protein.
  
     0.661
BAL99292.1
Hypothetical protein.
 
     0.630
pyrC
Dihydroorotase.
  
     0.576
BAM01743.1
Putative TPP binding protein; Belongs to the TPP enzyme family.
  
     0.551
BAM01648.1
Hypothetical protein.
  
     0.550
BAM01940.1
Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.510
BAM01943.1
Hypothetical protein.
       0.476
BAL99445.1
Hypothetical protein.
  
     0.460
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.