STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM02030.1Hypothetical protein. (720 aa)    
Predicted Functional Partners:
BAM01167.1
Hypothetical protein.
 
     0.762
BAM02032.1
Hypothetical protein.
 
     0.670
BAM00281.1
Putative ABC transporter substrate binding protein.
  
    0.624
BAL99112.1
Hypothetical protein.
  
     0.619
BAM00916.1
Hypothetical protein.
  
     0.614
BAL99860.1
Hypothetical protein.
  
     0.602
BAM01378.1
Putative serine/threonine protein kinase.
  
     0.571
BAL99149.1
Hypothetical protein.
  
     0.554
BAL98574.1
Hypothetical protein.
  
     0.531
BAL99117.1
Peptidase C11 family protein.
  
     0.521
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.