STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519345_02228Unannotated protein. (129 aa)    
Predicted Functional Partners:
GCA_000519345_02229
Unannotated protein.
       0.766
GCA_000519345_00282
Unannotated protein.
 
     0.680
GCA_000519345_04710
Unannotated protein.
  
     0.507
GCA_000519345_02230
Unannotated protein.
       0.480
GCA_000519345_03258
Unannotated protein.
  
     0.463
GCA_000519345_04550
Unannotated protein.
  
     0.452
GCA_000519345_01485
Unannotated protein.
    
  0.447
GCA_000519345_02227
Unannotated protein.
       0.439
GCA_000519345_02661
Unannotated protein.
  
     0.408
Your Current Organism:
Deinococcus pimensis
NCBI taxonomy Id: 926554
Other names: D. pimensis DSM 21231, Deinococcus pimensis DSM 21231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.