STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA77123.1PFAM: Pterin 4 alpha carbinolamine dehydratase. (76 aa)    
Predicted Functional Partners:
AGA78759.1
Phenylalanine-4-hydroxylase; PFAM: Biopterin-dependent aromatic amino acid hydroxylase; TIGRFAM: phenylalanine-4-hydroxylase, monomeric form.
 
 0.983
AGA77121.1
PFAM: Inositol monophosphatase family.
  
    0.815
rsmI
Putative S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.794
AGA77124.1
PFAM: Protein of unknown function (DUF493).
       0.774
AGA77376.1
PFAM: homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase.
  
  
 0.577
AGA77125.1
Parvulin-like peptidyl-prolyl isomerase; PFAM: PPIC-type PPIASE domain.
  
    0.549
AGA76386.1
methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase.
  
  
 0.432
AGA79221.1
PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.432
AGA77120.1
Putative dinucleotide-binding enzyme; PFAM: NADP oxidoreductase coenzyme F420-dependent.
       0.422
Your Current Organism:
Echinicola vietnamensis
NCBI taxonomy Id: 926556
Other names: E. vietnamensis DSM 17526, Echinicola vietnamensis DSM 17526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.