STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ37516.1Hypothetical protein; PFAM: Domain of unknown function DUF302. (128 aa)    
Predicted Functional Partners:
EIJ37515.1
PFAM: Multicopper oxidase; Copper resistance protein B precursor (CopB); TIGRFAM: copper-resistance protein, CopA family; manually curated.
       0.712
EIJ37513.1
Putative silver efflux pump; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.705
EIJ37514.1
PFAM: Outer membrane efflux protein.
       0.705
EIJ37517.1
PFAM: Protein of unknown function (DUF3347).
       0.610
EIJ37518.1
Hypothetical protein.
       0.529
EIJ37519.1
PFAM: Protein of unknown function (DUF3347).
       0.452
EIJ37512.1
Hypothetical protein.
       0.450
EIJ37500.1
PFAM: Amino acid permease.
 
     0.432
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.