STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ37687.1Hypothetical protein; PFAM: ASPIC and UnbV; FG-GAP repeat. (1098 aa)    
Predicted Functional Partners:
EIJ37690.1
PFAM: PAP2 superfamily.
 
    0.896
EIJ37691.1
Transcriptional regulator, effector-binding domain/component; PFAM: Bacterial transcription activator, effector binding domain.
 
     0.854
EIJ37689.1
Hypothetical protein; PFAM: ASPIC and UnbV.
 
    
0.798
EIJ37688.1
Hypothetical protein; PFAM: ASPIC and UnbV.
 
    
0.797
EIJ37684.1
RagB/SusD family protein; PFAM: SusD family.
  
 
   0.738
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.592
EIJ37683.1
TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
  
     0.474
EIJ38366.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
  
  
  0.451
EIJ38861.1
TonB-linked outer membrane protein, SusC/RagA family; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
  
     0.449
EIJ38545.1
Hypothetical protein.
  
     0.408
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.