STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ37690.1PFAM: PAP2 superfamily. (453 aa)    
Predicted Functional Partners:
EIJ37691.1
Transcriptional regulator, effector-binding domain/component; PFAM: Bacterial transcription activator, effector binding domain.
 
     0.944
EIJ37688.1
Hypothetical protein; PFAM: ASPIC and UnbV.
 
    0.897
EIJ37689.1
Hypothetical protein; PFAM: ASPIC and UnbV.
 
    0.897
EIJ37687.1
Hypothetical protein; PFAM: ASPIC and UnbV; FG-GAP repeat.
 
    0.896
EIJ40747.1
Hypothetical protein; PFAM: ASPIC and UnbV; FG-GAP repeat.
 
    0.778
EIJ39849.1
PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
  0.715
EIJ39561.1
PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain.
     
 0.696
EIJ37684.1
RagB/SusD family protein; PFAM: SusD family.
 
     0.643
EIJ39592.1
PFAM: Alkaline phosphatase; Belongs to the alkaline phosphatase family.
     
 0.531
EIJ37456.1
Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain.
  
 
   0.527
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.