STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ38089.1Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB-dependent Receptor Plug Domain. (757 aa)    
Predicted Functional Partners:
EIJ38090.1
Mn-dependent transcriptional regulator; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.
       0.590
mntH
Natural resistance-associated macrophage protein metal ion transporter NRAMP; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
     
 0.555
EIJ38092.1
Putative divalent heavy-metal cations transporter; PFAM: ZIP Zinc transporter.
       0.545
EIJ38723.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
   
 
 0.501
EIJ39780.1
Hypothetical protein.
  
     0.489
EIJ40494.1
Conserved repeat protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain.
  
 
   0.461
EIJ38344.1
Hypothetical protein.
  
 
   0.451
EIJ40493.1
Hypothetical protein.
  
 
   0.435
EIJ38724.1
PFAM: Gram-negative bacterial tonB protein.
   
 
 0.433
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
   0.427
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.