STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ38313.1TonB family protein; PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain. (465 aa)    
Predicted Functional Partners:
EIJ38312.1
Putative transcriptional regulator; PFAM: Penicillinase repressor.
 
 
 0.977
EIJ39545.1
Putative transcriptional regulator; PFAM: Penicillinase repressor.
 
 
 0.907
EIJ38314.1
PFAM: Tetratricopeptide repeat.
       0.778
EIJ39546.1
Antirepressor regulating drug resistance protein; PFAM: BlaR1 peptidase M56; TonB-dependent Receptor Plug Domain.
  
  
 
0.742
EIJ38316.1
Hypothetical protein.
 
     0.684
EIJ38315.1
Transposase family protein; PFAM: Transposase DDE domain.
       0.594
EIJ39059.1
Phosphoglyceromutase; PFAM: Metalloenzyme superfamily.
  
     0.505
EIJ39220.1
Organic solvent tolerance protein OstA; PFAM: OstA-like protein.
  
     0.486
EIJ40146.1
PFAM: YbbR-like protein.
  
     0.473
EIJ38724.1
PFAM: Gram-negative bacterial tonB protein.
 
  
 
0.464
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.