STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ38503.1PFAM: Protein of unknown function (DUF3078). (342 aa)    
Predicted Functional Partners:
dxs
Deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.634
EIJ38329.1
PFAM: Outer membrane protein (OmpH-like).
  
     0.592
EIJ37960.1
Hypothetical protein.
  
     0.571
EIJ40354.1
PFAM: Bacterial membrane protein YfhO.
  
     0.562
EIJ40072.1
Hypothetical protein.
  
     0.522
EIJ39611.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
  
     0.514
EIJ40511.1
Hypothetical protein.
  
     0.499
EIJ39145.1
Hypothetical protein.
  
     0.497
EIJ38579.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Protein of unknown function (DUF2723).
  
     0.468
EIJ38405.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.