STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ39281.1Endopolygalacturonase; PFAM: Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. (514 aa)    
Predicted Functional Partners:
EIJ37338.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
 
  0.967
EIJ37339.1
PFAM: Pectinesterase.
  
 0.967
EIJ38190.1
PFAM: Pectinesterase.
  
 0.966
EIJ39279.1
Hypothetical protein.
     0.937
EIJ39288.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
  0.903
EIJ37340.1
Putative unsaturated glucuronyl hydrolase; PFAM: Glycosyl Hydrolase Family 88.
     0.865
EIJ39278.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
 
  0.833
EIJ38184.1
Esterase/lipase; PFAM: GDSL-like Lipase/Acylhydrolase; alpha/beta hydrolase fold.
 
  0.822
EIJ38188.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
  0.812
EIJ39280.1
Glycogen debranching enzyme; PFAM: Protein of unknown function, DUF608.
       0.778
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.