STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ39315.1Putative HD superfamily hydrolase; PFAM: HD domain. (197 aa)    
Predicted Functional Partners:
EIJ40110.1
Outer membrane protein/protective antigen OMA87; PFAM: Calcineurin-like phosphoesterase.
  
     0.740
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.683
EIJ39316.1
Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
       0.675
EIJ39314.1
PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family.
       0.661
EIJ39317.1
Hypothetical protein.
       0.604
EIJ39318.1
Hypothetical protein.
       0.591
EIJ39319.1
Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.587
EIJ40109.1
Hypothetical protein.
  
    0.578
EIJ39313.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
       0.414
EIJ38001.1
Flagellar motor protein; PFAM: OmpA family.
    
   0.408
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.