STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ39452.1Hypothetical protein. (476 aa)    
Predicted Functional Partners:
EIJ39453.1
Hypothetical protein.
 
     0.958
EIJ39454.1
PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.845
EIJ40013.1
Hypothetical protein.
  
     0.685
EIJ40287.1
Hypothetical protein.
  
     0.636
EIJ40357.1
Hypothetical protein.
  
     0.633
EIJ40846.1
Hypothetical protein.
  
     0.588
EIJ38953.1
Hypothetical protein.
  
     0.553
EIJ38930.1
PFAM: Acyl CoA binding protein.
  
     0.545
EIJ37251.1
Hypothetical protein.
  
     0.507
EIJ39450.1
Hypothetical protein.
  
     0.465
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.