STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ39690.1PspC domain-containing protein; PFAM: PspC domain. (75 aa)    
Predicted Functional Partners:
EIJ39796.1
PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
   
 
 0.918
EIJ39719.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box.
   
 
 0.803
EIJ39691.1
PFAM: Protein of unknown function (DUF2851); manually curated.
       0.799
EIJ38832.1
PFAM: Membrane protein of unknown function.
 
    0.750
EIJ38915.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.
   
   0.743
EIJ40577.1
Hypothetical protein.
   
   0.743
EIJ39689.1
K+ transport system, NAD-binding component; PFAM: TrkA-N domain; Ion channel; TrkA-C domain.
       0.693
EIJ40188.1
Hypothetical protein.
  
     0.687
EIJ39220.1
Organic solvent tolerance protein OstA; PFAM: OstA-like protein.
  
     0.646
EIJ38326.1
Putative threonine efflux protein; PFAM: LysE type translocator.
  
     0.584
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.