STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ39780.1Hypothetical protein. (494 aa)    
Predicted Functional Partners:
EIJ39781.1
Outer membrane cobalamin receptor protein; PFAM: TonB-dependent Receptor Plug Domain.
 
     0.954
EIJ39782.1
Hypothetical protein.
 
     0.834
EIJ39779.1
PFAM: DoxX.
       0.776
EIJ40043.1
Hypothetical protein.
  
     0.572
EIJ40045.1
Hypothetical protein.
  
     0.501
EIJ39778.1
Hypothetical protein.
       0.490
EIJ38089.1
Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.489
EIJ38712.1
3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase); PFAM: Phytase.
  
     0.473
EIJ40044.1
Hypothetical protein.
  
     0.450
EIJ39114.1
ABC-type Co2+ transport system, periplasmic component; PFAM: Nickel uptake substrate-specific transmembrane region.
  
     0.445
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.