STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ40073.1PFAM: N-acetylmuramoyl-L-alanine amidase. (377 aa)    
Predicted Functional Partners:
EIJ40678.1
PFAM: Outer membrane lipoprotein carrier protein LolA.
    
   0.765
EIJ40074.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
 
     0.681
EIJ38410.1
Membrane carboxypeptidase/penicillin-binding protein; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase.
  
 
 0.677
EIJ40079.1
PFAM: Glycosyl hydrolase family 3 N terminal domain; Beta-lactamase.
 
  
 0.667
EIJ40075.1
Hypothetical protein.
       0.612
EIJ39251.1
Putative membrane protein; PFAM: Rhomboid family.
  
   0.594
EIJ39252.1
Putative membrane protein; PFAM: Rhomboid family.
  
   0.594
EIJ39836.1
Putative membrane protein; PFAM: Rhomboid family.
  
   0.594
EIJ40587.1
Putative membrane protein; PFAM: Rhomboid family.
  
   0.594
EIJ40072.1
Hypothetical protein.
       0.592
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.