STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ40314.1Hypothetical protein. (194 aa)    
Predicted Functional Partners:
EIJ40317.1
Helicase, type I site-specific restriction-modification system restriction subunit; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N).
 
     0.718
EIJ40315.1
PFAM: Protein of unknown function, DUF488.
       0.608
EIJ40316.1
Hypothetical protein.
       0.608
EIJ38115.1
T5orf172 domain-containing protein; PFAM: T5orf172 domain.
  
    0.499
EIJ38127.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.499
EIJ37866.1
Hypothetical protein.
  
    0.461
EIJ38121.1
PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM).
  
    0.461
EIJ40897.1
Hypothetical protein; Manually curated; non-canonical start codon.
  
    0.461
EIJ39926.1
PFAM: Protein of unknown function (DUF1016).
 
     0.443
EIJ40318.1
PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.
       0.432
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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