STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ40499.1PFAM: Protein of unknown function (DUF2874). (148 aa)    
Predicted Functional Partners:
EIJ40500.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
   
 0.868
EIJ40501.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
  
 0.771
EIJ40498.1
PFAM: Protein of unknown function (DUF2490).
       0.761
EIJ37457.1
PFAM: Protein of unknown function (DUF2874).
 
    0.614
EIJ40497.1
Dehydrogenase of unknown specificity; Short-chain alcohol dehydrogenase like; PFAM: short chain dehydrogenase.
   
   0.520
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
   0.477
EIJ40877.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
  
 0.439
EIJ40878.1
Signal transduction histidine kinase; PFAM: His Kinase A (phosphoacceptor) domain.
 
   
 0.415
hisB
Histidinol-phosphatase; PFAM: Polynucleotide kinase 3 phosphatase; Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol-phosphatase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
    
   0.414
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.